This hurts my brain because in the movie Superman only got in trouble in his fight with Batman because he didn't want to hurt him. It would have been a .5 second fight otherwise. Thor hasn't ever really had the power to wipe out anything. Sure he's tough but not really in Superman's league. If you maybe reversed the Bruces you might have a case though.
The problem is we can't really take the comics into account. With the multiverse set up there are too many things out there that exist in the comic world that just don't work in the world the movies take place in. Instead the best option is to eliminate everything but what's been presented in the movies and use that as the "canon" by which to determine the outcome of fights.
Shit storm begins